RefSeq NC_008942.1
DoriC accession number aORI10010037
OriC length 637 nt
OriC AT content 0.6688
The location of oriC region 1804856..530 nt
Browse in NCBI
OriC map
OriC sequences
GAGGGAAATGTATGAGTTCAAAGATAATAGGTTATTCTCCTGTTTAGGAGAAGTGATTTACCATGAATGTTTGTGATGGAAGTCTAAGATATTGCAGATGTTTTTTTAGTGTTTGATGAATATTTGCAAAAGAAGTCCCCCACCCCTTTGTTGCGAGTGGAAATGATATTTTTGTATTGCTGAAAAATACATTTTTCATTTATGTATTTTTGTAATCATAAATAGTTTCATTTTTTAACATATAAAGATTTTCTTTTGTTAGAGACAAAACAAAATACTTTTTTTGTACAACAATTAGAATCAGTTAGGAATAACCAAGAACAAACAAAAACAAAAATTTTATAAGCAACTAACTTTTTTCCCCCTCTAAAGCCTTTGAATATATAAAGTATTTAAACAAAACCAAAAAAAACCCTCCCTCAACCCTCCCCCTCCCCAACAAAGTTCCACTCGCAACAAAGGGGTGGGGGCGTTTTTGCACACGCAAACTCATCAAACGAGATTCTTCTATCCAAACAACAGGTTATCAAATTATCTCCACTCGAAACGTACCAATATCTTTGATTTTCACTCCACTCGCAGTAGTGGTACATTATCAGGAAAAAAAACATAATAACTTTGCAAGGATGGAATCACG
GAGGGAAATGTATGAGTTCAAAGATAATAGGTTATTCTCCTGTTTAGGAGAAGTGATTTACCATGAATGTTTGTGATGGAAGTCTAAGATATTGCAGATGTTTTTTTAGTGTTTGATGAATATTTGCAAAAGAAGTCCCCCACCCCTTTGTTGCGAGTGGAAATGATATTTTTGTATTGCTGAAAAATACATTTTTCATTTATGTATTTTTGTAATCATAAATAGTTTCATTTTTTAACATATAAAGATTTTCTTTTGTTAGAGACAAAACAAAATACTTTTTTTGTACAACAATTAGAATCAGTTAGGAATAACCAAGAACAAACAAAAACAAAAATTTTATAAGCAACTAACTTTTTTCCCCCTCTAAAGCCTTTGAATATATAAAGTATTTAAACAAAACCAAAAAAAACCCTCCCTCAACCCTCCCCCTCCCCAACAAAGTTCCACTCGCAACAAAGGGGTGGGGGCGTTTTTGCACACGCAAACTCATCAAACGAGATTCTTCTATCCAAACAACAGGTTATCAAATTATCTCCACTCGAAACGTACCAATATCTTTGATTTTCACTCCACTCGCAGTAGTGGTACATTATCAGGAAAAAAAACATAATAACTTTGCAAGGATGGAATCACG
GAGGGAAATGTATGAGTTCAAAGATAATAGGTTATTCTCCTGTTTAGGAGAAGTGATTTACCATGAATGTTTGTGATGGAAGTCTAAGATATTGCAGATGTTTTTTTAGTGTTTGATGAATATTTGCAAAAGAAGTCCCCCACCCCTTTGTTGCGAGTGGAAATGATATTTTTGTATTGCTGAAAAATACATTTTTCATTTATGTATTTTTGTAATCATAAATAGTTTCATTTTTTAACATATAAAGATTTTCTTTTGTTAGAGACAAAACAAAATACTTTTTTTGTACAACAATTAGAATCAGTTAGGAATAACCAAGAACAAACAAAAACAAAAATTTTATAAGCAACTAACTTTTTTCCCCCTCTAAAGCCTTTGAATATATAAAGTATTTAAACAAAACCAAAAAAAACCCTCCCTCAACCCTCCCCCTCCCCAACAAAGTTCCACTCGCAACAAAGGGGTGGGGGCGTTTTTGCACACGCAAACTCATCAAACGAGATTCTTCTATCCAAACAACAGGTTATCAAATTATCTCCACTCGAAACGTACCAATATCTTTGATTTTCACTCCACTCGCAGTAGTGGTACATTATCAGGAAAAAAAACATAATAACTTTGCAAGGATGGAATCACG
ORB     AT-rich region
The information of repeat sequences

Motif TYCCMCWCSC

StartP-valueSite
4458.15e-07CCCAACAAAGTTCCACTCGCAACAAAGGGG
4271.25e-06CCCTCAACCCTCCCCCTCCCCAACAAAGTT
5713.20e-06TTGATTTTCACTCCACTCGCAGTAGTGGTA
1363.42e-06GCAAAAGAAGTCCCCCACCCCTTTGTTGCG
4767.67e-06GGGGGCGTTTTTGCACACGCAAACTCATCA

Motif GGGGYG

StartP-valueSite
4671.39e-05CAAAGGGGTGGGGGCGTTTTTGCACA
4613.78e-05TCGCAACAAAGGGGTGGGGGCGTTTT

Motif AHGWTWTTYTTBTRTT

StartP-valueSite
293.27e-08CAAAGATAATAGGTTATTCTCCTGTTTAGGAGAAGT
1632.29e-07GCGAGTGGAAATGATATTTTTGTATTGCTGAAAAAT
2453.53e-07TTAACATATAAAGATTTTCTTTTGTTAGAGACAAAA
983.97e-07GATATTGCAGATGTTTTTTTAGTGTTTGATGAATAT
4976.85e-07AACTCATCAAACGAGATTCTTCTATCCAAACAACAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010037 100.0 637 0 0 1 637 1 637 0.0 1177