RefSeq NC_006396.1
DoriC accession number aORI10010125
OriC length 663 nt
OriC AT content 0.463
The location of oriC region 1400751..1401413 nt
Browse in NCBI
OriC map
OriC sequences
CGAGTGGTCTCAGGCGAATCAAGTTTCGGGTGTCATTCTGGTCGGCTCGGAGGCAGGCACGGAGGCCGAGATAATGCAGTGAGAGTACGTTTCGTATGCTTTCGACCGGTGAGGGAGTCGGAATACATCGAGAGTGGATTTCGTGTGCTTTCTACCCGGTGGTGATGGGGCAATCAGTCCAGAGTGAGAGAGTACGTTTCGTGTGCTTTCCCCCTCTTCCTTGGAGAGAGACGAGGATATAACCGATGAGCCAGCGGGTCGGTGGAGCAAACCGAGGTGAGTGCTCAACACCCCACTGTGTCGAGTGTTCTTCGAGAGAGTCGAGGATAGGCCTCGTAACACACCCCACTCTGTCAAGTGTTCGGCGTGGGTAGCTGGATGTCTCCATGCCCCACCCCACCGTGTCGAGTGTTCTTCGAGAGAATCCAAGATAGGTCGCACAACACACCCCACCGTGTCAAGTGTTCGACGTGGGTAGCTGGATGTCTCCATGCCCCACCCCACTATTCCGAATATTACTCTTGATTGCTATCGGTGAAGAGTGATCAAAAGACACTCCACTACATCAAGTGCTAACCGGCAGACGTCGGCGAGCTGTATTTTCACACAATACACTTGACGCGGTGGTTTTATACATGCGGGCCGAATCAAATGCACTAGAGG
CGAGTGGTCTCAGGCGAATCAAGTTTCGGGTGTCATTCTGGTCGGCTCGGAGGCAGGCACGGAGGCCGAGATAATGCAGTGAGAGTACGTTTCGTATGCTTTCGACCGGTGAGGGAGTCGGAATACATCGAGAGTGGATTTCGTGTGCTTTCTACCCGGTGGTGATGGGGCAATCAGTCCAGAGTGAGAGAGTACGTTTCGTGTGCTTTCCCCCTCTTCCTTGGAGAGAGACGAGGATATAACCGATGAGCCAGCGGGTCGGTGGAGCAAACCGAGGTGAGTGCTCAACACCCCACTGTGTCGAGTGTTCTTCGAGAGAGTCGAGGATAGGCCTCGTAACACACCCCACTCTGTCAAGTGTTCGGCGTGGGTAGCTGGATGTCTCCATGCCCCACCCCACCGTGTCGAGTGTTCTTCGAGAGAATCCAAGATAGGTCGCACAACACACCCCACCGTGTCAAGTGTTCGACGTGGGTAGCTGGATGTCTCCATGCCCCACCCCACTATTCCGAATATTACTCTTGATTGCTATCGGTGAAGAGTGATCAAAAGACACTCCACTACATCAAGTGCTAACCGGCAGACGTCGGCGAGCTGTATTTTCACACAATACACTTGACGCGGTGGTTTTATACATGCGGGCCGAATCAAATGCACTAGAGG
CGAGTGGTCTCAGGCGAATCAAGTTTCGGGTGTCATTCTGGTCGGCTCGGAGGCAGGCACGGAGGCCGAGATAATGCAGTGAGAGTACGTTTCGTATGCTTTCGACCGGTGAGGGAGTCGGAATACATCGAGAGTGGATTTCGTGTGCTTTCTACCCGGTGGTGATGGGGCAATCAGTCCAGAGTGAGAGAGTACGTTTCGTGTGCTTTCCCCCTCTTCCTTGGAGAGAGACGAGGATATAACCGATGAGCCAGCGGGTCGGTGGAGCAAACCGAGGTGAGTGCTCAACACCCCACTGTGTCGAGTGTTCTTCGAGAGAGTCGAGGATAGGCCTCGTAACACACCCCACTCTGTCAAGTGTTCGGCGTGGGTAGCTGGATGTCTCCATGCCCCACCCCACCGTGTCGAGTGTTCTTCGAGAGAATCCAAGATAGGTCGCACAACACACCCCACCGTGTCAAGTGTTCGACGTGGGTAGCTGGATGTCTCCATGCCCCACCCCACTATTCCGAATATTACTCTTGATTGCTATCGGTGAAGAGTGATCAAAAGACACTCCACTACATCAAGTGCTAACCGGCAGACGTCGGCGAGCTGTATTTTCACACAATACACTTGACGCGGTGGTTTTATACATGCGGGCCGAATCAAATGCACTAGAGG
ORB     AT-rich region
The information of repeat sequences

Motif CRYDMCMCACCCCACYGTGTCRAGTGTTCBTCGWGRGWRBC

StartP-valueSite
3866.12e-22TGGATGTCTCCATGCCCCACCCCACCGTGTCGAGTGTTCTTCGAGAGAATCCAAGATAGGT
4392.22e-20AGATAGGTCGCACAACACACCCCACCGTGTCAAGTGTTCGACGTGGGTAGCTGGATGTCTC
3359.09e-20GGATAGGCCTCGTAACACACCCCACTCTGTCAAGTGTTCGGCGTGGGTAGCTGGATGTCTC
2825.70e-19CCGAGGTGAGTGCTCAACACCCCACTGTGTCGAGTGTTCTTCGAGAGAGTCGAGGATAGGC
4909.37e-17TGGATGTCTCCATGCCCCACCCCACTATTCCGAATATTACTCTTGATTGCTATCGGTGAAG

Motif GAGAGTRSRTTTCGTRTGCTTTCBMCC

StartP-valueSite
814.61e-16ATAATGCAGTGAGAGTACGTTTCGTATGCTTTCGACCGGTGAGGGAG
1886.81e-16TCCAGAGTGAGAGAGTACGTTTCGTGTGCTTTCCCCCTCTTCCTTGG
1303.91e-15GGAATACATCGAGAGTGGATTTCGTGTGCTTTCTACCCGGTGGTGAT

Motif ABAHAATVCACT

StartP-valueSite
6053.59e-07CTGTATTTTCACACAATACACTTGACGCGGTG
5511.37e-06AGTGATCAAAAGACACTCCACTACATCAAGTG
691.79e-06ACGGAGGCCGAGATAATGCAGTGAGAGTACGT
6472.49e-06TGCGGGCCGAATCAAATGCACTAGAGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010125 100.0 663 0 0 1 663 1 663 0.0 1225
aORI10010125 90.179 112 11 0 393 504 289 400 1.07e-36 147
aORI10010125 90.179 112 11 0 289 400 393 504 1.07e-36 147