RefSeq NC_006396.1
DoriC accession number aORI10010123
OriC length 828 nt
OriC AT content 0.4505
The location of oriC region 1127861..1128688 nt
Browse in NCBI
OriC map
OriC sequences
CGGAGAGAGTAGCGGTCACTGTCGATTGATTGCGTCGCAAACGGCGTGTTTTTCGCGGGAACACCACCCTTCGAGTGTTCTTTGGAGGAGCGTGGCTGGCCAGCTATCACTCCAGCGGCTGTTCACGACTGGACAGCCTGTACAGCCCGGATATACCAACCAGACAGGGATTACGCTACTGTACGAAGTCCATGCGAGTGATACTGAGTCGGTACACCACCCTACAAGTGTTCTGACATCACCAGACAGTTGACCCGACACCACCATACAAGTGTTCTATCACCACCCTGCGAGTGTTTCCAGTTCGACTACAGCCAGACCAGAATGGTGAACACGTGTTCACACACCACCCTGCAAGTGTTCGCACGGAAGGTGTGCAAGCGTCTGAATCTACGAAAACACCACGCTGCAAGTGTTTTTGTGGCGTTGTTCCGAGTTCCGATTCGCCCTTGCACACCACCGTGCAAGTGTTTCACGTACTGCTTGAGGTGTGTGAGAGTATGCTGAGACACCACCCTGCAAGTGTTCCAAAAGGCCGTTTTGGGCGGTTTTCCCGTCGGATCGGGTTCACACCACCCTGCAAGTGTTTTCGAAACGGAATACGTAGGGTCGTGGTGGAACCGGACGGACACACCGGTCTGCAAGTGTTCTACACACTGCAGCGGGGAACAGATACCAGATAACCGCCTGTTTGCACCCCCTTTCACTGTCTACTGTGGGGACACACACCACCCTGCAACTGTTCTGGACGCCACAATAGTTAGACCGCCGCTGAACACACACACACCACCGTGCAAGTGTTCTGCCGTGTGAGCCGACGGGGGGTGG
CGGAGAGAGTAGCGGTCACTGTCGATTGATTGCGTCGCAAACGGCGTGTTTTTCGCGGGAACACCACCCTTCGAGTGTTCTTTGGAGGAGCGTGGCTGGCCAGCTATCACTCCAGCGGCTGTTCACGACTGGACAGCCTGTACAGCCCGGATATACCAACCAGACAGGGATTACGCTACTGTACGAAGTCCATGCGAGTGATACTGAGTCGGTACACCACCCTACAAGTGTTCTGACATCACCAGACAGTTGACCCGACACCACCATACAAGTGTTCTATCACCACCCTGCGAGTGTTTCCAGTTCGACTACAGCCAGACCAGAATGGTGAACACGTGTTCACACACCACCCTGCAAGTGTTCGCACGGAAGGTGTGCAAGCGTCTGAATCTACGAAAACACCACGCTGCAAGTGTTTTTGTGGCGTTGTTCCGAGTTCCGATTCGCCCTTGCACACCACCGTGCAAGTGTTTCACGTACTGCTTGAGGTGTGTGAGAGTATGCTGAGACACCACCCTGCAAGTGTTCCAAAAGGCCGTTTTGGGCGGTTTTCCCGTCGGATCGGGTTCACACCACCCTGCAAGTGTTTTCGAAACGGAATACGTAGGGTCGTGGTGGAACCGGACGGACACACCGGTCTGCAAGTGTTCTACACACTGCAGCGGGGAACAGATACCAGATAACCGCCTGTTTGCACCCCCTTTCACTGTCTACTGTGGGGACACACACCACCCTGCAACTGTTCTGGACGCCACAATAGTTAGACCGCCGCTGAACACACACACACCACCGTGCAAGTGTTCTGCCGTGTGAGCCGACGGGGGGTGG
CGGAGAGAGTAGCGGTCACTGTCGATTGATTGCGTCGCAAACGGCGTGTTTTTCGCGGGAACACCACCCTTCGAGTGTTCTTTGGAGGAGCGTGGCTGGCCAGCTATCACTCCAGCGGCTGTTCACGACTGGACAGCCTGTACAGCCCGGATATACCAACCAGACAGGGATTACGCTACTGTACGAAGTCCATGCGAGTGATACTGAGTCGGTACACCACCCTACAAGTGTTCTGACATCACCAGACAGTTGACCCGACACCACCATACAAGTGTTCTATCACCACCCTGCGAGTGTTTCCAGTTCGACTACAGCCAGACCAGAATGGTGAACACGTGTTCACACACCACCCTGCAAGTGTTCGCACGGAAGGTGTGCAAGCGTCTGAATCTACGAAAACACCACGCTGCAAGTGTTTTTGTGGCGTTGTTCCGAGTTCCGATTCGCCCTTGCACACCACCGTGCAAGTGTTTCACGTACTGCTTGAGGTGTGTGAGAGTATGCTGAGACACCACCCTGCAAGTGTTCCAAAAGGCCGTTTTGGGCGGTTTTCCCGTCGGATCGGGTTCACACCACCCTGCAAGTGTTTTCGAAACGGAATACGTAGGGTCGTGGTGGAACCGGACGGACACACCGGTCTGCAAGTGTTCTACACACTGCAGCGGGGAACAGATACCAGATAACCGCCTGTTTGCACCCCCTTTCACTGTCTACTGTGGGGACACACACCACCCTGCAACTGTTCTGGACGCCACAATAGTTAGACCGCCGCTGAACACACACACACCACCGTGCAAGTGTTCTGCCGTGTGAGCCGACGGGGGGTGG
ORB     AT-rich region
The information of repeat sequences

Motif ACACACCACCCTGCAAGTGTTC

StartP-valueSite
3428.22e-14ACACGTGTTCACACACCACCCTGCAAGTGTTCGCACGGAAGG
7822.97e-13CTGAACACACACACACCACCGTGCAAGTGTTCTGCCGTGTGA
5072.97e-13GAGTATGCTGAGACACCACCCTGCAAGTGTTCCAAAAGGCCG
7244.66e-13CTGTGGGGACACACACCACCCTGCAACTGTTCTGGACGCCAC
5686.43e-13CGGATCGGGTTCACACCACCCTGCAAGTGTTTTCGAAACGGA

Motif ACACCACCCTDCAAGTGTTYT

StartP-valueSite
2142.42e-13CTGAGTCGGTACACCACCCTACAAGTGTTCTGACATCACCA
2581.52e-12AGTTGACCCGACACCACCATACAAGTGTTCTATCACCACCC
3994.53e-12ATCTACGAAAACACCACGCTGCAAGTGTTTTTGTGGCGTTG
617.53e-12TTTCGCGGGAACACCACCCTTCGAGTGTTCTTTGGAGGAGC
4541.41e-11TCGCCCTTGCACACCACCGTGCAAGTGTTTCACGTACTGCT

Motif GGTGTGCAAGHGT

StartP-valueSite
3725.95e-08TCGCACGGAAGGTGTGCAAGCGTCTGAATCTAC
6368.49e-08CGGACACACCGGTCTGCAAGTGTTCTACACACT
4885.35e-07TACTGCTTGAGGTGTGTGAGAGTATGCTGAGAC
3271.03e-06AGACCAGAATGGTGAACACGTGTTCACACACCA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010123 100.0 828 0 0 1 828 1 828 0.0 1530
aORI10010183 81.298 647 81 23 211 825 65 703 0.0 488