RefSeq NC_006396.1
DoriC accession number aORI10010122
OriC length 1083 nt
OriC AT content 0.5032
The location of oriC region 936323..937405 nt
Browse in NCBI
OriC map
OriC sequences
ACTCAGTGTTACTCTTTCCACTTATTAACACCTAACCGATAAGCCGTCAAGCGTCTCCGTGTACGAGTCAGCCCCTTGCATCCACCGGGCCAAGAGTGTACCTGTCACCGCCCGGTGATGAATGACGTCGTACTGCGTTCGAATCGTCCGTGCCCGGATTGTCGTATCGCTTCCTTCGTGAGCTCTCATATGGACTACGCGGCTGCTGCCGTGGGTGGCGCTTTGGGGTGGGTGTGCCGTTGATACAGGTGTGCTGGTCCCTGCCTGACTAGTGGAAAGCTTGTCCCAGACGCACCTGACACCGAGTGTACTGACTGGTTGTCATTGTTTGGTCGATAGATTCTCGTCTCAGACACACCCCGCACCGAGTGAAAACTCGGGACCTCCACGATATTTCTGATGAGCGGCAAGTAACCGGGTTTCGGGACGCAAAGCGGACAAAGCCGCGAAGTCGCGGGTTGAATCGAATATGCGACCCGACTGCCGTTTTACACTAGTCCGCGAGCGGCTCTCGCAGGCACACACCAGGTACCGAGTGTACTGACCGCTGATCGTTATCGGCACAAGAGTGCTCTGGTAGCAAATATCTCTATCGAATGGCTGGAACCAGATCAGATGGGAACATCCAGTACAGCCATTGGCCCCTGGGACACACACCTGCTTCCGAGTTAGTTCAGTTCTCAAATTCATGTGTTAGAGGGAAATCAAACGCAGATCAACTCTAATGACTTTAGACACTAGTTGGAAATTTATCAATACTAACTCGGAAGCAGGTGTGTCCGAACTCATCTGAGTTTGTGACTTGCTCACATATATTACTATTGGTAATTAAACTAACTCCGAATTGGGTGTCTGCACGGTAAGAGTTCAGTACACTATCGCGAATTCGAACCTCTTCAGGACACAGGCCACTCGAAAAGTCAAGTGTTGTCAGCATGCAATCTGGTTTGAAACTCCAGCAACCACTAACTCGGAACTTGGTGTGTTACTACCTAATTCAAAGTTAGTTTTGATATGCTTCTGCAGCGGCTTTTATAGACTCTTGACCTCTAACTAACTCGAAATCAGGTCCAAAGAGTATAT
ACTCAGTGTTACTCTTTCCACTTATTAACACCTAACCGATAAGCCGTCAAGCGTCTCCGTGTACGAGTCAGCCCCTTGCATCCACCGGGCCAAGAGTGTACCTGTCACCGCCCGGTGATGAATGACGTCGTACTGCGTTCGAATCGTCCGTGCCCGGATTGTCGTATCGCTTCCTTCGTGAGCTCTCATATGGACTACGCGGCTGCTGCCGTGGGTGGCGCTTTGGGGTGGGTGTGCCGTTGATACAGGTGTGCTGGTCCCTGCCTGACTAGTGGAAAGCTTGTCCCAGACGCACCTGACACCGAGTGTACTGACTGGTTGTCATTGTTTGGTCGATAGATTCTCGTCTCAGACACACCCCGCACCGAGTGAAAACTCGGGACCTCCACGATATTTCTGATGAGCGGCAAGTAACCGGGTTTCGGGACGCAAAGCGGACAAAGCCGCGAAGTCGCGGGTTGAATCGAATATGCGACCCGACTGCCGTTTTACACTAGTCCGCGAGCGGCTCTCGCAGGCACACACCAGGTACCGAGTGTACTGACCGCTGATCGTTATCGGCACAAGAGTGCTCTGGTAGCAAATATCTCTATCGAATGGCTGGAACCAGATCAGATGGGAACATCCAGTACAGCCATTGGCCCCTGGGACACACACCTGCTTCCGAGTTAGTTCAGTTCTCAAATTCATGTGTTAGAGGGAAATCAAACGCAGATCAACTCTAATGACTTTAGACACTAGTTGGAAATTTATCAATACTAACTCGGAAGCAGGTGTGTCCGAACTCATCTGAGTTTGTGACTTGCTCACATATATTACTATTGGTAATTAAACTAACTCCGAATTGGGTGTCTGCACGGTAAGAGTTCAGTACACTATCGCGAATTCGAACCTCTTCAGGACACAGGCCACTCGAAAAGTCAAGTGTTGTCAGCATGCAATCTGGTTTGAAACTCCAGCAACCACTAACTCGGAACTTGGTGTGTTACTACCTAATTCAAAGTTAGTTTTGATATGCTTCTGCAGCGGCTTTTATAGACTCTTGACCTCTAACTAACTCGAAATCAGGTCCAAAGAGTATAT
ACTCAGTGTTACTCTTTCCACTTATTAACACCTAACCGATAAGCCGTCAAGCGTCTCCGTGTACGAGTCAGCCCCTTGCATCCACCGGGCCAAGAGTGTACCTGTCACCGCCCGGTGATGAATGACGTCGTACTGCGTTCGAATCGTCCGTGCCCGGATTGTCGTATCGCTTCCTTCGTGAGCTCTCATATGGACTACGCGGCTGCTGCCGTGGGTGGCGCTTTGGGGTGGGTGTGCCGTTGATACAGGTGTGCTGGTCCCTGCCTGACTAGTGGAAAGCTTGTCCCAGACGCACCTGACACCGAGTGTACTGACTGGTTGTCATTGTTTGGTCGATAGATTCTCGTCTCAGACACACCCCGCACCGAGTGAAAACTCGGGACCTCCACGATATTTCTGATGAGCGGCAAGTAACCGGGTTTCGGGACGCAAAGCGGACAAAGCCGCGAAGTCGCGGGTTGAATCGAATATGCGACCCGACTGCCGTTTTACACTAGTCCGCGAGCGGCTCTCGCAGGCACACACCAGGTACCGAGTGTACTGACCGCTGATCGTTATCGGCACAAGAGTGCTCTGGTAGCAAATATCTCTATCGAATGGCTGGAACCAGATCAGATGGGAACATCCAGTACAGCCATTGGCCCCTGGGACACACACCTGCTTCCGAGTTAGTTCAGTTCTCAAATTCATGTGTTAGAGGGAAATCAAACGCAGATCAACTCTAATGACTTTAGACACTAGTTGGAAATTTATCAATACTAACTCGGAAGCAGGTGTGTCCGAACTCATCTGAGTTTGTGACTTGCTCACATATATTACTATTGGTAATTAAACTAACTCCGAATTGGGTGTCTGCACGGTAAGAGTTCAGTACACTATCGCGAATTCGAACCTCTTCAGGACACAGGCCACTCGAAAAGTCAAGTGTTGTCAGCATGCAATCTGGTTTGAAACTCCAGCAACCACTAACTCGGAACTTGGTGTGTTACTACCTAATTCAAAGTTAGTTTTGATATGCTTCTGCAGCGGCTTTTATAGACTCTTGACCTCTAACTAACTCGAAATCAGGTCCAAAGAGTATAT
ORB     AT-rich region
The information of repeat sequences

Motif RSACACACCNGGYACCGAGTGWA

StartP-valueSite
5188.84e-13GCTCTCGCAGGCACACACCAGGTACCGAGTGTACTGACCGCTG
2886.99e-12AGCTTGTCCCAGACGCACCTGACACCGAGTGTACTGACTGGTT
3511.10e-11TTCTCGTCTCAGACACACCCCGCACCGAGTGAAAACTCGGGAC
6502.93e-10GGCCCCTGGGACACACACCTGCTTCCGAGTTAGTTCAGTTCTC
786.45e-10TCAGCCCCTTGCATCCACCGGGCCAAGAGTGTACCTGTCACCG

Motif ACTAACTCGGAABYDGGTG

StartP-valueSite
7582.01e-11ATTTATCAATACTAACTCGGAAGCAGGTGTGTCCGAACT
9658.27e-11TCCAGCAACCACTAACTCGGAACTTGGTGTGTTACTACC
8331.45e-10TGGTAATTAAACTAACTCCGAATTGGGTGTCTGCACGGT
10531.90e-10TTGACCTCTAACTAACTCGAAATCAGGTCCAAAGAGTAT

Motif GGGTGG

StartP-valueSite
2262.15e-04TGGCGCTTTGGGGTGGGTGTGCCGTT
2132.15e-04CTGCTGCCGTGGGTGGCGCTTTGGGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010122 100.0 1083 0 0 1 1083 1 1083 0.0 2001