RefSeq | GCF_000230695.2 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Accession number | NC_020541.1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Lineage | bacteria, proteobacteria, gammaproteobacteria, xanthomonadales, rhodanobacteraceae, rhodanobacter. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
DoriC accession number | ORI97010152 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC length | 243 nt | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC AT content | 0.502058 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
The location of oriC region | 1495..1737 nt | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Browse in NCBI | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC map | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC sequences |
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaaGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnan
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
5'-DnaA box-3'
3'-DnaA box-5'
Spacer
DnaA-trio
ATP-DnaA box
AT-rich region GATC   CtrA binding motif Fis binding site IHF binding site |
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The information of repeat sequences |
Motif TCHTTG
Motif TRTGGATAAKSGGKGG
Motif GTTATCCAC
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Distribution of genes on leading or lagging strand | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Distribution of nucleotide on leading or lagging strand | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The result of BLAST |
Download
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