RefSeq GCF_000230695.2
Accession number NC_020541.1
DoriC accession number ORI97010152
OriC length 243 nt
OriC AT content 0.502058
The location of oriC region 1495..1737 nt
Browse in NCBI
OriC map
OriC sequences
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaaGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnan
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
dnaAGCGACGATCGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGTCCTTGAAGTTATCCACAAACAGCCCACCGGCAGGCCGCCCTTTCAGGCACAATCAAGAATCATTGCAAATCATTGATAGACAAAAGAAAAACAGGTCGCGAACGTTATCCACCGGTACCACCACAACCACCAACTTCTTTTAAAGACAGAACAGCAGGTATAGGGGAAGCACAGCCdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif TCHTTG

StartP-valueSite
1371.07e-04TCATTGCAAATCATTGATAGACAAAA
1271.07e-04CAATCAAGAATCATTGCAAATCATTG
672.47e-04GACAGATCGGTCCTTGAAGTTATCCA
2033.64e-04ACCACCAACTTCTTTTAAAGACAGAA

Motif TRTGGATAAKSGGKGG

StartP-valueSite
421.40e-10GGGCCCAAGCTGTGGATAATGGGTGGACAGATCGGT
191.89e-09CGGCAAAGTTTATGGATAAGCGGGGGCCCAAGCTGT

Motif GTTATCCAC

StartP-valueSite
1712.28e-06GGTCGCGAACGTTATCCACCGGTACCACC
752.28e-06GGTCCTTGAAGTTATCCACAAACAGCCCA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score