RefSeq GCF_000224005.2
Accession number NZ_CP007031.1
DoriC accession number ORI97014395
OriC length 525 nt
OriC AT content 0.512381
The location of oriC region 24074..24598 nt
Browse in NCBI
OriC map
OriC sequences
-CGGGGGATTCTACCCCAGGGAGGGGTGACGGAAGACGAGGATCTTGCTGACATTTTCCATCCGCGGATATCTTGATCTGGGGTATGCTGGATCTGCTCGGCCCCGCCGTTTCGCGCGAATCTAATCAAAATAAATATATAGATATTTAAAGTCTGTAGTTATTATTGATCCCTGTGGATATCCGGATAACTCTTTTTTTTTTATATATATCATGCGCTTGAGAGGCCGGATCGAGTGGATGAAGCTGAAGATATCCTGTGGATAACTTGTGACTGAATCAGGCCCCGATTTTGTCCACCAGTTTATCCATCCACTTATCCACAGGGTTGCGCACAGCTTATCAAGGTTCCCTTTCTTTTCAGTGCTTTAGCGATTTCTCTGGAGATCCAGGACGAGCGGGAGAGGGGCGCACGCAGTCGCTATGGGATGTGCTCTTTCTCGTCGGGCGTTTGGCCGTTAACCCGTAGTAGAATAGCCCTGCAAAACCTGCGTTCTTAACACATCAAACTGCCCGGGCACTGCTTChemE
-CGGGGGATTCTACCCCAGGGAGGGGTGACGGAAGACGAGGATCTTGCTGACATTTTCCATCCGCGGATATCTTGATCTGGGGTATGCTGGATCTGCTCGGCCCCGCCGTTTCGCGCGAATCTAATCAAAATAAATATATAGATATTTAAAGTCTGTAGTTATTATTGATCCCTGTGGATATCCGGATAACTCTTTTTTTTTTATATATATCATGCGCTTGAGAGGCCGGATCGAGTGGATGAAGCTGAAGATATCCTGTGGATAACTTGTGACTGAATCAGGCCCCGATTTTGTCCACCAGTTTATCCATCCACTTATCCACAGGGTTGCGCACAGCTTATCAAGGTTCCCTTTCTTTTCAGTGCTTTAGCGATTTCTCTGGAGATCCAGGACGAGCGGGAGAGGGGCGCACGCAGTCGCTATGGGATGTGCTCTTTCTCGTCGGGCGTTTGGCCGTTAACCCGTAGTAGAATAGCCCTGCAAAACCTGCGTTCTTAACACATCAAACTGCCCGGGCACTGCTTChemE
-CGGGGGATTCTACCCCAGGGAGGGGTGACGGAAGACGAGGATCTTGCTGACATTTTCCATCCGCGGATATCTTGATCTGGGGTATGCTGGATCTGCTCGGCCCCGCCGTTTCGCGCGAATCTAATCAAAATAAATATATAGATATTTAAAGTCTGTAGTTATTATTGATCCCTGTGGATATCCGGATAACTCTTTTTTTTTTATATATATCATGCGCTTGAGAGGCCGGATCGAGTGGATGAAGCTGAAGATATCCTGTGGATAACTTGTGACTGAATCAGGCCCCGATTTTGTCCACCAGTTTATCCATCCACTTATCCACAGGGTTGCGCACAGCTTATCAAGGTTCCCTTTCTTTTCAGTGCTTTAGCGATTTCTCTGGAGATCCAGGACGAGCGGGAGAGGGGCGCACGCAGTCGCTATGGGATGTGCTCTTTCTCGTCGGGCGTTTGGCCGTTAACCCGTAGTAGAATAGCCCTGCAAAACCTGCGTTCTTAACACATCAAACTGCCCGGGCACTGCTTChemE
-CGGGGGATTCTACCCCAGGGAGGGGTGACGGAAGACGAGGATCTTGCTGACATTTTCCATCCGCGGATATCTTGATCTGGGGTATGCTGGATCTGCTCGGCCCCGCCGTTTCGCGCGAATCTAATCAAAATAAATATATAGATATTTAAAGTCTGTAGTTATTATTGATCCCTGTGGATATCCGGATAACTCTTTTTTTTTTATATATATCATGCGCTTGAGAGGCCGGATCGAGTGGATGAAGCTGAAGATATCCTGTGGATAACTTGTGACTGAATCAGGCCCCGATTTTGTCCACCAGTTTATCCATCCACTTATCCACAGGGTTGCGCACAGCTTATCAAGGTTCCCTTTCTTTTCAGTGCTTTAGCGATTTCTCTGGAGATCCAGGACGAGCGGGAGAGGGGCGCACGCAGTCGCTATGGGATGTGCTCTTTCTCGTCGGGCGTTTGGCCGTTAACCCGTAGTAGAATAGCCCTGCAAAACCTGCGTTCTTAACACATCAAACTGCCCGGGCACTGCTTChemE
-CGGGGGATTCTACCCCAGGGAGGGGTGACGGAAGACGAGGATCTTGCTGACATTTTCCATCCGCGGATATCTTGATCTGGGGTATGCTGGATCTGCTCGGCCCCGCCGTTTCGCGCGAATCTAATCAAAATAAATATATAGATATTTAAAGTCTGTAGTTATTATTGATCCCTGTGGATATCCGGATAACTCTTTTTTTTTTATATATATCATGCGCTTGAGAGGCCGGATCGAGTGGATGAAGCTGAAGATATCCTGTGGATAACTTGTGACTGAATCAGGCCCCGATTTTGTCCACCAGTTTATCCATCCACTTATCCACAGGGTTGCGCACAGCTTATCAAGGTTCCCTTTCTTTTCAGTGCTTTAGCGATTTCTCTGGAGATCCAGGACGAGCGGGAGAGGGGCGCACGCAGTCGCTATGGGATGTGCTCTTTCTCGTCGGGCGTTTGGCCGTTAACCCGTAGTAGAATAGCCCTGCAAAACCTGCGTTCTTAACACATCAAACTGCCCGGGCACTGCTTChemE
-CGGGGGATTCTACCCCAGGGAGGGGTGACGGAAGACGAGGATCTTGCTGACATTTTCCATCCGCGGATATCTTGATCTGGGGTATGCTGGATCTGCTCGGCCCCGCCGTTTCGCGCGAATCTAATCAAAATAAATATATAGATATTTAAAGTCTGTAGTTATTATTGATCCCTGTGGATATCCGGATAACTCTTTTTTTTTTATATATATCATGCGCTTGAGAGGCCGGATCGAGTGGATGAAGCTGAAGATATCCTGTGGATAACTTGTGACTGAATCAGGCCCCGATTTTGTCCACCAGTTTATCCATCCACTTATCCACAGGGTTGCGCACAGCTTATCAAGGTTCCCTTTCTTTTCAGTGCTTTAGCGATTTCTCTGGAGATCCAGGACGAGCGGGAGAGGGGCGCACGCAGTCGCTATGGGATGTGCTCTTTCTCGTCGGGCGTTTGGCCGTTAACCCGTAGTAGAATAGCCCTGCAAAACCTGCGTTCTTAACACATCAAACTGCCCGGGCACTGCTTChemE
-CGGGGGATTCTACCCCAGGGAGGGGTGACGGAAGACGAGGATCTTGCTGACATTTTCCATCCGCGGATATCTTGATCTGGGGTATGCTGGATCTGCTCGGCCCCGCCGTTTCGCGCGAATCTAATCAAAATAAATATATAGATATTTAAAGTCTGTAGTTATTATTGATCCCTGTGGATATCCGGATAACTCTTTTTTTTTTATATATATCATGCGCTTGAGAGGCCGGATCGAGTGGATGAAGCTGAAGATATCCTGTGGATAACTTGTGACTGAATCAGGCCCCGATTTTGTCCACCAGTTTATCCATCCACTTATCCACAGGGTTGCGCACAGCTTATCAAGGTTCCCTTTCTTTTCAGTGCTTTAGCGATTTCTCTGGAGATCCAGGACGAGCGGGAGAGGGGCGCACGCAGTCGCTATGGGATGTGCTCTTTCTCGTCGGGCGTTTGGCCGTTAACCCGTAGTAGAATAGCCCTGCAAAACCTGCGTTCTTAACACATCAAACTGCCCGGGCACTGCTTChemE
-CGGGGGATTCTACCCCAGGGAGGGGTGACGGAAGACGAGGATCTTGCTGACATTTTCCATCCGCGGATATCTTGATCTGGGGTATGCTGGATCTGCTCGGCCCCGCCGTTTCGCGCGAATCTAATCAAAATAAATATATAGATATTTAAAGTCTGTAGTTATTATTGATCCCTGTGGATATCCGGATAACTCTTTTTTTTTTATATATATCATGCGCTTGAGAGGCCGGATCGAGTGGATGAAGCTGAAGATATCCTGTGGATAACTTGTGACTGAATCAGGCCCCGATTTTGTCCACCAGTTTATCCATCCACTTATCCACAGGGTTGCGCACAGCTTATCAAGGTTCCCTTTCTTTTCAGTGCTTTAGCGATTTCTCTGGAGATCCAGGACGAGCGGGAGAGGGGCGCACGCAGTCGCTATGGGATGTGCTCTTTCTCGTCGGGCGTTTGGCCGTTAACCCGTAGTAGAATAGCCCTGCAAAACCTGCGTTCTTAACACATCAAACTGCCCGGGCACTGCTTCheme
-CGGGGGATTCTACCCCAGGGAGGGGTGACGGAAGACGAGGATCTTGCTGACATTTTCCATCCGCGGATATCTTGATCTGGGGTATGCTGGATCTGCTCGGCCCCGCCGTTTCGCGCGAATCTAATCAAAATAAATATATAGATATTTAAAGTCTGTAGTTATTATTGATCCCTGTGGATATCCGGATAACTCTTTTTTTTTTATATATATCATGCGCTTGAGAGGCCGGATCGAGTGGATGAAGCTGAAGATATCCTGTGGATAACTTGTGACTGAATCAGGCCCCGATTTTGTCCACCAGTTTATCCATCCACTTATCCACAGGGTTGCGCACAGCTTATCAAGGTTCCCTTTCTTTTCAGTGCTTTAGCGATTTCTCTGGAGATCCAGGACGAGCGGGAGAGGGGCGCACGCAGTCGCTATGGGATGTGCTCTTTCTCGTCGGGCGTTTGGCCGTTAACCCGTAGTAGAATAGCCCTGCAAAACCTGCGTTCTTAACACATCAAACTGCCCGGGCACTGCTTChemE
-CGGGGGATTCTACCCCAGGGAGGGGTGACGGAAGACGAGGATCTTGCTGACATTTTCCATCCGCGGATATCTTGATCTGGGGTATGCTGGATCTGCTCGGCCCCGCCGTTTCGCGCGAATCTAATCAAAATAAATATATAGATATTTAAAGTCTGTAGTTATTATTGATCCCTGTGGATATCCGGATAACTCTTTTTTTTTTATATATATCATGCGCTTGAGAGGCCGGATCGAGTGGATGAAGCTGAAGATATCCTGTGGATAACTTGTGACTGAATCAGGCCCCGATTTTGTCCACCAGTTTATCCATCCACTTATCCACAGGGTTGCGCACAGCTTATCAAGGTTCCCTTTCTTTTCAGTGCTTTAGCGATTTCTCTGGAGATCCAGGACGAGCGGGAGAGGGGCGCACGCAGTCGCTATGGGATGTGCTCTTTCTCGTCGGGCGTTTGGCCGTTAACCCGTAGTAGAATAGCCCTGCAAAACCTGCGTTCTTAACACATCAAACTGCCCGGGCACTGCTTChemE
-CGGGGGATTCTACCCCAGGGAGGGGTGACGGAAGACGAGGATCTTGCTGACATTTTCCATCCGCGGATATCTTGATCTGGGGTATGCTGGATCTGCTCGGCCCCGCCGTTTCGCGCGAATCTAATCAAAATAAATATATAGATATTTAAAGTCTGTAGTTATTATTGATCCCTGTGGATATCCGGATAACTCTTTTTTTTTTATATATATCATGCGCTTGAGAGGCCGGATCGAGTGGATGAAGCTGAAGATATCCTGTGGATAACTTGTGACTGAATCAGGCCCCGATTTTGTCCACCAGTTTATCCATCCACTTATCCACAGGGTTGCGCACAGCTTATCAAGGTTCCCTTTCTTTTCAGTGCTTTAGCGATTTCTCTGGAGATCCAGGACGAGCGGGAGAGGGGCGCACGCAGTCGCTATGGGATGTGCTCTTTCTCGTCGGGCGTTTGGCCGTTAACCCGTAGTAGAATAGCCCTGCAAAACCTGCGTTCTTAACACATCAAACTGCCCGGGCACTGCTTChemE
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CYSTGGATAWCYTG

StartP-valueSite
2564.44e-08TGAAGATATCCTGTGGATAACTTGTGACTGAATC
1728.36e-08TTATTGATCCCTGTGGATATCCGGATAACTCTTT
614.06e-07CATTTTCCATCCGCGGATATCTTGATCTGGGGTA
3774.81e-07TTAGCGATTTCTCTGGAGATCCAGGACGAGCGGG
4768.47e-07AGTAGAATAGCCCTGCAAAACCTGCGTTCTTAAC

Motif CADCTTATCMA

StartP-valueSite
3341.91e-07GGGTTGCGCACAGCTTATCAAGGTTCCCTTT
2992.88e-06TTTTGTCCACCAGTTTATCCATCCACTTATC
3114.05e-06GTTTATCCATCCACTTATCCACAGGGTTGCG
1189.28e-06GTTTCGCGCGAATCTAATCAAAATAAATATA

Motif ATADATAT

StartP-valueSite
1301.30e-05TCTAATCAAAATAAATATATAGATATTT
1382.79e-05AAATAAATATATAGATATTTAAAGTCTG
2034.50e-05TTTTTTTTTTATATATATCATGCGCTTG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score