RefSeq GCF_000193495.2
Accession number NZ_AP023410.1
DoriC accession number ORI97024962
OriC length 462 nt
OriC AT content 0.506494
The location of oriC region 2326685..2327146 nt
Browse in NCBI
OriC map
OriC sequences
hemEGGCCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGTCTACCGTCCGTTTCATCAGTCCCTCATCTCTAACGAATAAAAGAAAATAAAGAAATGATGAGGTTTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTTCCGAAAATGTACCCCAGTTTTCCCCGACTGTGTACAGAATGTATCCCTTCGGAAAATAAGGGTTTTCGGGAGTTATCCAGAAAAACCCCCAGAACCCCTGTGTACAACTCACAGTGTCGGGCGAAGACTCACTTGTCCACGGTACTCGGTACGGACTGTGATGATACTCCGTACTATCCCCATGTACCCCAGTACCGCACAAAGTACTCGGTACAGTACTCACTGAAGTACTAACGGACTGAATGATGGGTTATCCTTGCTCATCTCATCGGAATGGAAGGCACAGGAAAA-
hemEGGCCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGTCTACCGTCCGTTTCATCAGTCCCTCATCTCTAACGAATAAAAGAAAATAAAGAAATGATGAGGTTTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTTCCGAAAATGTACCCCAGTTTTCCCCGACTGTGTACAGAATGTATCCCTTCGGAAAATAAGGGTTTTCGGGAGTTATCCAGAAAAACCCCCAGAACCCCTGTGTACAACTCACAGTGTCGGGCGAAGACTCACTTGTCCACGGTACTCGGTACGGACTGTGATGATACTCCGTACTATCCCCATGTACCCCAGTACCGCACAAAGTACTCGGTACAGTACTCACTGAAGTACTAACGGACTGAATGATGGGTTATCCTTGCTCATCTCATCGGAATGGAAGGCACAGGAAAA-
hemEGGCCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGTCTACCGTCCGTTTCATCAGTCCCTCATCTCTAACGAATAAAAGAAAATAAAGAAATGATGAGGTTTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTTCCGAAAATGTACCCCAGTTTTCCCCGACTGTGTACAGAATGTATCCCTTCGGAAAATAAGGGTTTTCGGGAGTTATCCAGAAAAACCCCCAGAACCCCTGTGTACAACTCACAGTGTCGGGCGAAGACTCACTTGTCCACGGTACTCGGTACGGACTGTGATGATACTCCGTACTATCCCCATGTACCCCAGTACCGCACAAAGTACTCGGTACAGTACTCACTGAAGTACTAACGGACTGAATGATGGGTTATCCTTGCTCATCTCATCGGAATGGAAGGCACAGGAAAA-
hemEGGCCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGTCTACCGTCCGTTTCATCAGTCCCTCATCTCTAACGAATAAAAGAAAATAAAGAAATGATGAGGTTTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTTCCGAAAATGTACCCCAGTTTTCCCCGACTGTGTACAGAATGTATCCCTTCGGAAAATAAGGGTTTTCGGGAGTTATCCAGAAAAACCCCCAGAACCCCTGTGTACAACTCACAGTGTCGGGCGAAGACTCACTTGTCCACGGTACTCGGTACGGACTGTGATGATACTCCGTACTATCCCCATGTACCCCAGTACCGCACAAAGTACTCGGTACAGTACTCACTGAAGTACTAACGGACTGAATGATGGGTTATCCTTGCTCATCTCATCGGAATGGAAGGCACAGGAAAA-
hemEGGCCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGTCTACCGTCCGTTTCATCAGTCCCTCATCTCTAACGAATAAAAGAAAATAAAGAAATGATGAGGTTTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTTCCGAAAATGTACCCCAGTTTTCCCCGACTGTGTACAGAATGTATCCCTTCGGAAAATAAGGGTTTTCGGGAGTTATCCAGAAAAACCCCCAGAACCCCTGTGTACAACTCACAGTGTCGGGCGAAGACTCACTTGTCCACGGTACTCGGTACGGACTGTGATGATACTCCGTACTATCCCCATGTACCCCAGTACCGCACAAAGTACTCGGTACAGTACTCACTGAAGTACTAACGGACTGAATGATGGGTTATCCTTGCTCATCTCATCGGAATGGAAGGCACAGGAAAA-
hemEGGCCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGTCTACCGTCCGTTTCATCAGTCCCTCATCTCTAACGAATAAAAGAAAATAAAGAAATGATGAGGTTTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTTCCGAAAATGTACCCCAGTTTTCCCCGACTGTGTACAGAATGTATCCCTTCGGAAAATAAGGGTTTTCGGGAGTTATCCAGAAAAACCCCCAGAACCCCTGTGTACAACTCACAGTGTCGGGCGAAGACTCACTTGTCCACGGTACTCGGTACGGACTGTGATGATACTCCGTACTATCCCCATGTACCCCAGTACCGCACAAAGTACTCGGTACAGTACTCACTGAAGTACTAACGGACTGAATGATGGGTTATCCTTGCTCATCTCATCGGAATGGAAGGCACAGGAAAA-
hemEGGCCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGTCTACCGTCCGTTTCATCAGTCCCTCATCTCTAACGAATAAAAGAAAATAAAGAAATGATGAGGTTTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTTCCGAAAATGTACCCCAGTTTTCCCCGACTGTGTACAGAATGTATCCCTTCGGAAAATAAGGGTTTTCGGGAGTTATCCAGAAAAACCCCCAGAACCCCTGTGTACAACTCACAGTGTCGGGCGAAGACTCACTTGTCCACGGTACTCGGTACGGACTGTGATGATACTCCGTACTATCCCCATGTACCCCAGTACCGCACAAAGTACTCGGTACAGTACTCACTGAAGTACTAACGGACTGAATGATGGGTTATCCTTGCTCATCTCATCGGAATGGAAGGCACAGGAAAA-
hemeGGCCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGTCTACCGTCCGTTTCATCAGTCCCTCATCTCTAACGAATAAAAGAAAATAAAGAAATGATGAGGTTTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTTCCGAAAATGTACCCCAGTTTTCCCCGACTGTGTACAGAATGTATCCCTTCGGAAAATAAGGGTTTTCGGGAGTTATCCAGAAAAACCCCCAGAACCCCTGTGTACAACTCACAGTGTCGGGCGAAGACTCACTTGTCCACGGTACTCGGTACGGACTGTGATGATACTCCGTACTATCCCCATGTACCCCAGTACCGCACAAAGTACTCGGTACAGTACTCACTGAAGTACTAACGGACTGAATGATGGGTTATCCTTGCTCATCTCATCGGAATGGAAGGCACAGGAAAA-
hemEGGCCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGTCTACCGTCCGTTTCATCAGTCCCTCATCTCTAACGAATAAAAGAAAATAAAGAAATGATGAGGTTTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTTCCGAAAATGTACCCCAGTTTTCCCCGACTGTGTACAGAATGTATCCCTTCGGAAAATAAGGGTTTTCGGGAGTTATCCAGAAAAACCCCCAGAACCCCTGTGTACAACTCACAGTGTCGGGCGAAGACTCACTTGTCCACGGTACTCGGTACGGACTGTGATGATACTCCGTACTATCCCCATGTACCCCAGTACCGCACAAAGTACTCGGTACAGTACTCACTGAAGTACTAACGGACTGAATGATGGGTTATCCTTGCTCATCTCATCGGAATGGAAGGCACAGGAAAA-
hemEGGCCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGTCTACCGTCCGTTTCATCAGTCCCTCATCTCTAACGAATAAAAGAAAATAAAGAAATGATGAGGTTTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTTCCGAAAATGTACCCCAGTTTTCCCCGACTGTGTACAGAATGTATCCCTTCGGAAAATAAGGGTTTTCGGGAGTTATCCAGAAAAACCCCCAGAACCCCTGTGTACAACTCACAGTGTCGGGCGAAGACTCACTTGTCCACGGTACTCGGTACGGACTGTGATGATACTCCGTACTATCCCCATGTACCCCAGTACCGCACAAAGTACTCGGTACAGTACTCACTGAAGTACTAACGGACTGAATGATGGGTTATCCTTGCTCATCTCATCGGAATGGAAGGCACAGGAAAA-
hemEGGCCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGTCTACCGTCCGTTTCATCAGTCCCTCATCTCTAACGAATAAAAGAAAATAAAGAAATGATGAGGTTTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTTCCGAAAATGTACCCCAGTTTTCCCCGACTGTGTACAGAATGTATCCCTTCGGAAAATAAGGGTTTTCGGGAGTTATCCAGAAAAACCCCCAGAACCCCTGTGTACAACTCACAGTGTCGGGCGAAGACTCACTTGTCCACGGTACTCGGTACGGACTGTGATGATACTCCGTACTATCCCCATGTACCCCAGTACCGCACAAAGTACTCGGTACAGTACTCACTGAAGTACTAACGGACTGAATGATGGGTTATCCTTGCTCATCTCATCGGAATGGAAGGCACAGGAAAA-
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif RGTACTCGGTAC

StartP-valueSite
3125.48e-08ACTTGTCCACGGTACTCGGTACGGACTGTGAT
3741.14e-07TACCGCACAAAGTACTCGGTACAGTACTCACT
3343.94e-06GGACTGTGATGATACTCCGTACTATCCCCATG
268.42e-06TGTGCGGAGAAGTCGTCGGTTCTCATCGGGTC
2321.30e-05GGAAAATAAGGGTTTTCGGGAGTTATCCAGAA

Motif GGWSYGWATGDBGSGKT

StartP-valueSite
1454.16e-09TTCTTTAGGGGGTGTGTATGTCGGGGTACCCACCTTT
4076.61e-09AAGTACTAACGGACTGAATGATGGGTTATCCTTGCTC
446.61e-09GTTCTCATCGGGTCCGTATGGGGCGTTCACTATCCGT

Motif CAGTGTSSGGMGA

StartP-valueSite
134.61e-08CCTCGCCCTTCAGTGTGCGGAGAAGTCGTCGGT
2837.04e-08GTACAACTCACAGTGTCGGGCGAAGACTCACTT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score