RefSeq GCF_000146025.2
Accession number NC_020419.1
DoriC accession number ORI97227552
OriC length 354 nt
OriC AT content 0.725989
The location of oriC region 7852..8205 nt
Browse in NCBI
OriC map
OriC sequences
-GCGAAGCGTTCGGCGGAAGAGATTACTCAACCGTCATGCACGCCTGCAATAAGATAAAAGAAAAAATGGACTCCGATCCATATTTTAACGCTAAAATTAATAAAATTATCAAAAAAATACGAAGCGAGCAATAAAAAGAACAACTCTGCGCATAAAATATAAAAATTTGATATAATATAAAAGCAGGCTAATAATTCTAATAACTTCATTGCTTTATCAGCATAGTTATCTTCATTAAATTTTTATAAATTCTATTTGATAATTATACTTTTTTAGCATTCAAAAAAACTTATCAACAATATACAGGACATTATAGTAACTAATGTACTTTTATAGAAATTTAGGAGAAAGTGAdnaN
-GCGAAGCGTTCGGCGGAAGAGATTACTCAACCGTCATGCACGCCTGCAATAAGATAAAAGAAAAAATGGACTCCGATCCATATTTTAACGCTAAAATTAATAAAATTATCAAAAAAATACGAAGCGAGCAATAAAAAGAACAACTCTGCGCATAAAATATAAAAATTTGATATAATATAAAAGCAGGCTAATAATTCTAATAACTTCATTGCTTTATCAGCATAGTTATCTTCATTAAATTTTTATAAATTCTATTTGATAATTATACTTTTTTAGCATTCAAAAAAACTTATCAACAATATACAGGACATTATAGTAACTAATGTACTTTTATAGAAATTTAGGAGAAAGTGAdnaN
-GCGAAGCGTTCGGCGGAAGAGATTACTCAACCGTCATGCACGCCTGCAATAAGATAAAAGAAAAAATGGACTCCGATCCATATTTTAACGCTAAAATTAATAAAATTATCAAAAAAATACGAAGCGAGCAATAAAAAGAACAACTCTGCGCATAAAATATAAAAATTTGATATAATATAAAAGCAGGCTAATAATTCTAATAACTTCATTGCTTTATCAGCATAGTTATCTTCATTAAATTTTTATAAATTCTATTTGATAATTATACTTTTTTAGCATTCAAAAAAACTTATCAACAATATACAGGACATTATAGTAACTAATGTACTTTTATAGAAATTTAGGAGAAAGTGAdnaN
-GCGAAGCGTTCGGCGGAAGAGATTACTCAACCGTCATGCACGCCTGCAATAAGATAAAAGAAAAAATGGACTCCGATCCATATTTTAACGCTAAAATTAATAAAATTATCAAAAAAATACGAAGCGAGCAATAAAAAGAACAACTCTGCGCATAAAATATAAAAATTTGATATAATATAAAAGCAGGCTAATAATTCTAATAACTTCATTGCTTTATCAGCATAGTTATCTTCATTAAATTTTTATAAATTCTATTTGATAATTATACTTTTTTAGCATTCAAAAAAACTTATCAACAATATACAGGACATTATAGTAACTAATGTACTTTTATAGAAATTTAGGAGAAAGTGAdnaN
-GCGAAGCGTTCGGCGGAAGAGATTACTCAACCGTCATGCACGCCTGCAATAAGATAAAAGAAAAAATGGACTCCGATCCATATTTTAACGCTAAAATTAATAAAATTATCAAAAAAATACGAAGCGAGCAATAAAAAGAACAACTCTGCGCATAAAATATAAAAATTTGATATAATATAAAAGCAGGCTAATAATTCTAATAACTTCATTGCTTTATCAGCATAGTTATCTTCATTAAATTTTTATAAATTCTATTTGATAATTATACTTTTTTAGCATTCAAAAAAACTTATCAACAATATACAGGACATTATAGTAACTAATGTACTTTTATAGAAATTTAGGAGAAAGTGAdnaN
-GCGAAGCGTTCGGCGGAAGAGATTACTCAACCGTCATGCACGCCTGCAATAAGATAAAAGAAAAAATGGACTCCGATCCATATTTTAACGCTAAAATTAATAAAATTATCAAAAAAATACGAAGCGAGCAATAAAAAGAACAACTCTGCGCATAAAATATAAAAATTTGATATAATATAAAAGCAGGCTAATAATTCTAATAACTTCATTGCTTTATCAGCATAGTTATCTTCATTAAATTTTTATAAATTCTATTTGATAATTATACTTTTTTAGCATTCAAAAAAACTTATCAACAATATACAGGACATTATAGTAACTAATGTACTTTTATAGAAATTTAGGAGAAAGTGAdnaN
-GCGAAGCGTTCGGCGGAAGAGATTACTCAACCGTCATGCACGCCTGCAATAAGATAAAAGAAAAAATGGACTCCGATCCATATTTTAACGCTAAAATTAATAAAATTATCAAAAAAATACGAAGCGAGCAATAAAAAGAACAACTCTGCGCATAAAATATAAAAATTTGATATAATATAAAAGCAGGCTAATAATTCTAATAACTTCATTGCTTTATCAGCATAGTTATCTTCATTAAATTTTTATAAATTCTATTTGATAATTATACTTTTTTAGCATTCAAAAAAACTTATCAACAATATACAGGACATTATAGTAACTAATGTACTTTTATAGAAATTTAGGAGAAAGTGAdnaN
-GCGAAGCGTTCGGCGGAAGAGATTACTCAACCGTCATGCACGCCTGCAATAAGATAAAAGAAAAAATGGACTCCGATCCATATTTTAACGCTAAAATTAATAAAATTATCAAAAAAATACGAAGCGAGCAATAAAAAGAACAACTCTGCGCATAAAATATAAAAATTTGATATAATATAAAAGCAGGCTAATAATTCTAATAACTTCATTGCTTTATCAGCATAGTTATCTTCATTAAATTTTTATAAATTCTATTTGATAATTATACTTTTTTAGCATTCAAAAAAACTTATCAACAATATACAGGACATTATAGTAACTAATGTACTTTTATAGAAATTTAGGAGAAAGTGAdnan
-GCGAAGCGTTCGGCGGAAGAGATTACTCAACCGTCATGCACGCCTGCAATAAGATAAAAGAAAAAATGGACTCCGATCCATATTTTAACGCTAAAATTAATAAAATTATCAAAAAAATACGAAGCGAGCAATAAAAAGAACAACTCTGCGCATAAAATATAAAAATTTGATATAATATAAAAGCAGGCTAATAATTCTAATAACTTCATTGCTTTATCAGCATAGTTATCTTCATTAAATTTTTATAAATTCTATTTGATAATTATACTTTTTTAGCATTCAAAAAAACTTATCAACAATATACAGGACATTATAGTAACTAATGTACTTTTATAGAAATTTAGGAGAAAGTGAdnaN
-GCGAAGCGTTCGGCGGAAGAGATTACTCAACCGTCATGCACGCCTGCAATAAGATAAAAGAAAAAATGGACTCCGATCCATATTTTAACGCTAAAATTAATAAAATTATCAAAAAAATACGAAGCGAGCAATAAAAAGAACAACTCTGCGCATAAAATATAAAAATTTGATATAATATAAAAGCAGGCTAATAATTCTAATAACTTCATTGCTTTATCAGCATAGTTATCTTCATTAAATTTTTATAAATTCTATTTGATAATTATACTTTTTTAGCATTCAAAAAAACTTATCAACAATATACAGGACATTATAGTAACTAATGTACTTTTATAGAAATTTAGGAGAAAGTGAdnaN
-GCGAAGCGTTCGGCGGAAGAGATTACTCAACCGTCATGCACGCCTGCAATAAGATAAAAGAAAAAATGGACTCCGATCCATATTTTAACGCTAAAATTAATAAAATTATCAAAAAAATACGAAGCGAGCAATAAAAAGAACAACTCTGCGCATAAAATATAAAAATTTGATATAATATAAAAGCAGGCTAATAATTCTAATAACTTCATTGCTTTATCAGCATAGTTATCTTCATTAAATTTTTATAAATTCTATTTGATAATTATACTTTTTTAGCATTCAAAAAAACTTATCAACAATATACAGGACATTATAGTAACTAATGTACTTTTATAGAAATTTAGGAGAAAGTGAdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif SSAAGCSWKC

StartP-valueSite
1203.60e-07CAAAAAAATACGAAGCGAGCAATAAAAAGA
27.95e-07GCGAAGCGTTCGGCGGAAGAG
381.06e-06CAACCGTCATGCACGCCTGCAATAAGATAA

Motif GGMGRAAGWG

StartP-valueSite
129.58e-08CGAAGCGTTCGGCGGAAGAGATTACTCAAC
3441.06e-06TAGAAATTTAGGAGAAAGTGA

Motif SWCTSCG

StartP-valueSite
1441.36e-05AAAAGAACAACTCTGCGCATAAAATAT
693.81e-05AGAAAAAATGGACTCCGATCCATATTT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score