DEG database

Accession Number DEG10170238
Gene name rplU
Gene Ref 88195458
RefSeq NC_007795
Function Class Ribosomal proteins
Description 50S ribosomal protein L21
Uniprot accession Q2FXS8
Organism Staphylococcus aureus NCTC 8325
Condition Rich medium
Uniprot accession Q2FXS8
Operon ID in DOOR database 176063
COG COG0261J
Location 1659193..1659501(-); leading strand
Reference

Chaudhuri RR, et al (2009). Comprehensive identification of essential Staphylococcus aureus genes using Transposon-Mediated Differential Hybridisation (TMDH). BMC Genomics, 10:291.

Nucleotide sequence Length: 309 nt

ATGTTTGCTATTATTGAAACAGGTGGAAAACAAATCAAAGTAGAAGAAGGTCAAGAAATCTTCGTTGAAAAATTAGACGTAAACGAAGGAGATACTTTTACATTTGATAAAGTATTATTTGTAGGTGGAGATTCAGTTAAAGTTGGAGCGCCAACAGTTGAAGGTGCAACAGTTACTGCTACTGTTAATAAACAAGGTCGCGGTAAAAAAATCACTGTATTCACATACAAACGTCGTAAAAATTCAAAACGTAAAAAAGGCCATCGTCAACCATACACTAAATTAACAATCGATAAAATCAACGCGTAA

Amino acid sequence Length: 102 aa

MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGDSVKVGAPTVEGATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKINA

Annotation By eggNOG
eggNOG otrhologs 1280.SAXN108_1674
EC number
GO annotation

GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904

KEGG_ko

K02888

KEGG_Pathway

ko03010,map03010

eggNOG OGs

1V9YH@1239,4GZCT@90964,4HIGK@91061,COG0261@1,COG0261@2

eggNOG free text description

This protein binds to 23S rRNA in the presence of protein L20