DoriC

RefSeq

GCF_000171795.2

Accession number

NZ_CP005388.1

DoriC accession number

ORI97207589

OriC length

95 nt

OriC AT content

0.821053

The location of oriC region

1635935..1636029 nt

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OriC map

OriC sequences

-ACCTTTTGAAAAATAAAATACAAAAGCGGATTTTAACCTTTTTTTATAAAATTTAAGATAAAATTTATACATTATGCAAAATTTAAAGAGAGATTdnaA

-ACCTTTTGAAAAATAAAATACAAAAGCGGATTTTAACCTTTTTTTATAAAATTTAAGATAAAATTTATACATTATGCAAAATTTAAAGAGAGATTdnaa

-ACCTTTTGAAAAATAAAATACAAAAGCGGATTTTAACCTTTTTTTATAAAATTTAAGATAAAATTTATACATTATGCAAAATTTAAAGAGAGATTdnaA

5'-DnaA box-3' 3'-DnaA box-5' Spacer DnaA-trio ATP-DnaA box
AT-rich region GATC CtrA binding motif Fis binding site IHF binding site

The information of repeat sequences

Motif CCTTTT

Start	P-value		Site
37	1.30e-04	CGGATTTTAA	CCTTTT	TTTATAAAAT
2	1.30e-04	A	CCTTTT	GAAAAATAAA

Motif SRGATT

Start	P-value		Site
27	5.29e-05	AATACAAAAG	CGGATT	TTAACCTTTT
90	6.14e-04	AATTTAAAGA	GAGATT

Motif TTATRC

Start	P-value		Site
72	1.85e-04	AATTTATACA	TTATGC	AAAATTTAAA
65	1.02e-03	AAGATAAAAT	TTATAC	ATTATGCAAA

Distribution of genes on leading or lagging strand

Distribution of nucleotide on leading or lagging strand

The result of BLAST

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subject_id	identity	aln_length	mismatches	gaps	q_start	q_end	s_start	s_end	e_value	bit_score